Journal of Chemical Ecology
○ Springer Science and Business Media LLC
Preprints posted in the last 30 days, ranked by how well they match Journal of Chemical Ecology's content profile, based on 10 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.
Hierl, K.; Schnauber, C.; Kücklich, M.; Heinlein, B.; Birkemeyer, C.; Weiss, B. M.; Widdig, A.; Schäfer, L.
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Body odors inform human kin recognition. However, underlying chemical mechanisms and how they relate to body odor perception are still unclear. The present study therefore simultaneously examined perceptual body odor similarity according to human raters, its chemical basis and the link between the two in human families. The study included 33 raters who assessed body odors collected from 60 odor donors belonging to 15 biological families. Each family comprised a mother, a father and one adolescent same-sex sibling-dyad (8 sister dyads, 7 brother dyads). Body odor sampling was conducted with cotton pads for presentation to human raters and with thermal desorption (TD) tubes for Gas Chromatography-Mass Spectrometry (GC-MS) analysis. Relatedness and sex predicted perceived body odor similarity in parent-offspring versus unrelated control dyads. Analyses of chemical profiles revealed greater body odor similarity within families than between unrelated individuals. Parallel to the perceptual results, relatedness and sex predicted chemical similarity based on whole odor profiles. Finally, a machine-learning prediction model integrating perceptual and chemical data, revealed a small but significant positive association between chemical similarity of body odor and perceived olfactory similarity according to human raters, suggesting that odor perception is partly informed by chemical characteristics. Overall, the present study extends our understanding of human chemosensory communication and supports the notion of a family-specific olfactory signature.
Fauvergue, X.; Pecharova, K.; Buch, I.; Auguste, A.; Borowiec, N.; Lapeyre, B.
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When mating among genetically related individuals results in inbreeding depression, various behaviors and life-history traits evolve to favor outbreeding. Long-range sexual communication following natal dispersal is one such adaptation. In parasitoid wasps with single-locus complementary sex determination (sl-CSD), inbreeding increases the production of unviable or sterile diploid males. Mastrus ridens is such a species, with a genetic load underpinned by sl-CSD, combined with a high potential for sibmating because siblings emerge in close proximity from the same host and become sexually active shortly after emergence. With this context in mind, we investigated the mate-finding strategy of M. ridens using complementary behavioral, chemical, and electrophysiological approaches. Wind-tunnel bioassays and field experiments showed that males orient toward virgin females and, to a lesser extent, mated females. This attraction from a distance appeared to be the sole form of conspecific attraction. Chemical analyses using static and dynamic headspace sampling and solvent extracts, followed by GC-MS, revealed several potential pheromonal candidates, including methyl 6-methylsalicylate. This compound elicited reproducible antennal responses in males in GC-EAD recordings. Altogether, our results suggest that mate finding in M. ridens is guided by a volatile sex pheromone emitted by females, with methyl 6-methylsalicylate as one putative component. Such mate-finding mechanisms promote outbreeding and may explain the low proportion of unfit diploid males observed in natural populations. Surprisingly, chemical analyses suggested that males also emit this compound, whereas neither males nor females showed behavioral responses to males. This apparent discrepancy suggests that attraction may depend on a more complex pheromonal signal and opens further avenues for investigation.
Choudhary, A.; Budhwar, S.
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Characterizing the enzymatic accommodation of circular agricultural fertilizers is critical for informing strategies to remediate widespread soil sulfur hunger. Here, we present an exploratory in-silico investigation evaluating the active-site cleft of sulfate thiohydrolase (SoxB) across representative soil Proteobacteria. Following the crystallographic precedent of uncomplexed thiosulfate in PDB 2WDE, site-directed molecular docking indicated that the free thiosulfate polyanion binds favorably within the catalytic pocket (predicted affinity: -3.506 kcal/mol), yielding a substantially lower empirical energy barrier than hydrophobic elemental sulfur (S8, -1.409 kcal/mol). Comparative evaluation against the alkaline-adapted Thiobacillus denitrificans homolog revealed an elevated predicted binding affinity of -4.610 kcal/mol, suggesting a potential structural accommodation in high-pH calcareous soils (pH > 8.0). Unrestrained 5.0 ns all-atom molecular dynamics in explicit TIP3P solvent demonstrated initial structural stability of the unliganded host backbone (RMSD = 1.10 +/- 0.15 Angstrom). Energetic decomposition indicated that ligand association is governed predominantly by electrostatic interactions (delta-E_elec ~ -40 kcal/mol) with basic residues (His146, His269, Trp147; RMSF < 0.60 Angstrom), with a single-trajectory unbinding event observed at 3.2 ns. These computational observations provide an exploratory baseline characterizing the active-site electrostatic landscape of SoxB, generating working hypotheses for downstream empirical soil microcosm and in-planta trials.
Kay, W. T.; Tucker, M.; Storer, K.; Willis, K.
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Urban green infrastructure is increasingly promoted as a public-health intervention, yet the biological features that determine exposure to potentially beneficial plant-derived volatile compounds remain poorly understood. Here we quantified airborne terpenes and terpenoids across five contrasting urban greenspaces in Oxford, UK, and related chemical profiles to plant diversity, vegetation structure and surrounding habitat characteristics. Ambient air samples collected across spring and summer were analysed by thermal-desorption gas chromatography-mass spectrometry, alongside field surveys of taxonomic richness, canopy cover, vegetation volume and ground composition. Terpene and terpenoid scentscapes differed strongly among sites and through time, with monoterpenes dominating detected profiles. Sites with greater plant richness and greater vegetation volume below 1.5 m consistently showed higher terpene/terpenoid abundance, whereas total vegetation volume, canopy cover and tree abundance were weaker and less consistent predictors. These relationships were specific to plant-associated chemical classes and were not observed for predominantly anthropogenic volatile compounds. These patterns were resolved across only five independent sampling sites, and the relationships reported here should therefore be considered exploratory. Our findings suggest that human exposure to plant-derived volatiles in cities may be maximised not simply by increasing tree cover, but by designing biodiverse, structurally complex lower-to-mid-storey vegetation within the breathing zone. These results provide an empirical basis for incorporating scentscape ecology into health-oriented urban greenspace design.
Panke, Y.; Maolan, L.; Linhuai, X.; Jing, L.; Chunming, L.; Hui, B.
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To elucidate the resistance of hybrid larch (Larix spp.) clones to Dendrolimus superans and their chemical defense mechanisms, 46 clones were subjected to field feeding-infestation experiments. Insect resistance was comprehensively evaluated by the membership function method from three perspectives: insect weight change, frass weight and defoliation rate (damage consequences); pre- and post-infestation physiological indices (constitutive and induced resistance). High- and low-resistance materials screened from each perspective were further analyzed by widely targeted LC-MS metabolomics. The three damage indices differed highly significantly among clones (P<0.01) and were positively correlated, indicating abundant genetic variation in resistance. Clones such as -30-C, -35-A and -21-A showed strong overall resistance, whereas -28-E and -20-A showed high constitutive and induced resistance. Defence enzyme activities (POD, SOD, CAT, PPO and PAL) correlated closely with secondary metabolites (total phenolics, tannins and total flavonoids) and nutrients, and rose synergistically after feeding, reflecting synergy between constitutive and induced resistance. In total, 3,577 metabolites were identified, predominantly terpenoids (>90%). The three groups yielded 1,010, 1,086 and 922 differentially accumulated metabolites, and PCA separated high- from low-resistance materials in all groups. These metabolites were significantly enriched in metabolic pathways, biosynthesis of secondary metabolites, monoterpenoid and diterpenoid biosynthesis, and phenylpropanoid biosynthesis. In conclusion, resistance of hybrid larch to D. superans is jointly conferred by the defence enzyme system, secondary metabolite accumulation and a 'terpenoid-phenolic' metabolic network: terpenoids and phenolics act synergistically via the terpenoid and phenylpropanoid pathways, together forming the core of chemical defense and supporting the breeding of insect-resistant clones.
Bajorek, D.; Antol, W.; Miler, K.
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Ethanol occurs naturally in sugar-rich foods used by insects, but its effects in bees have been studied primarily in honeybees. We tested whether dietary ethanol affects survival and locomotor performance in workers of the bumblebee Bombus terrestris (L.). In the survival experiment, workers were fed ethanol (0, 1, or 10%) for 21 days; in the locomotor experiment, they were fed the same doses for one or seven days, after which we measured spontaneous movement using an open-field assay. We measured the proportion of time in movement, speed of movement, path meander (curviness), and arena exploration. The 10% ethanol concentration greatly increased the risk of mortality, whereas the estimated effect of 1% ethanol was smaller and statistically inconclusive. In terms of locomotion, the largest differences occurred after seven days of exposure to 10% ethanol. Workers in this treatment showed greater path meander and lower exploration than control workers. Speed was also lowest in this group. Evidence that exposure for seven days was worse than for one day at the same concentration was detected only for exploration. No clear locomotor effect was detected at 1% ethanol exposure. These findings provide comparative data on sustained ethanol exposure in bumblebees and show a strong concentration-dependent contrast, with substantial effects under high-concentration challenge but no clear effects on the measured endpoints at 1%.
Sakurai, M.; Ogiwara, S.; Osawa, R.; Junyang, Y.; Satoh, T.
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The human gut is home to more than 100 trillion bacteria, where various environmental factors, such as nutrients and gases, exist and influence them. The levels of fermentation gases in the gut, including CO2, fluctuate depending on the host's diet. However, how CO2, an environmental factor, affects the physiological states of gut anaerobes remains poorly understood, but CO2 is often utilized in their cultivation. Akkermansia muciniphila (A. muciniphila) is widely studied as a beneficial human gut microbe. However, the effects of CO2 on the physiological state of A. muciniphila are not fully understood. In this study, we focused on CO2 as an environmental factor and aimed to clarify how CO2 affects the physiological state of A. muciniphila. Culture experiments showed that compared with the absence of CO2, the presence of CO2 significantly increased the growth of A. muciniphila. The results of the metabolomic analysis revealed distinct metabolic profiles in the presence or absence of CO2. The tracing analysis using stable 13C-labelled CO2 demonstrated that CO2 was incorporated into various metabolites in the TCA cycle, the de novo purine/pyrimidine synthesis pathways, and other pathways. In addition, the activity of pyruvate carboxylase, which catalyses an anaplerotic reaction involving CO2 fixation to supply oxaloacetate (OAA) to the TCA cycle, was significantly higher in A. muciniphila cells grown in the presence of CO2. Moreover, supplementation with OAA increased the growth of A. muciniphila in a dose-dependent manner, mirroring the effects of CO2 supplementation. These findings suggest that A. muciniphila utilizes CO2 for an anaplerotic reaction in the TCA cycle and other pathways involving CO2 incorporation, facilitating metabolic flux to promote its robust growth.
Feng, G.; Duan, Z.; Hu, C.; Wang, J.; Xu, J.; Zhang, Y.; Meng, X.-Z.
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Hormesis is an important consideration in chemical risk assessment across most aquatic environments. Evidence suggests that hormetic responses are shaped by organismal physiological processes. Accordingly, predictions of hormesis under environmentally realistic conditions should account for physiological traits. Yet the role of these traits remains largely unexplored. This study investigated how baseline growth rate modulates antibiotic responses in the harmful cyanobacterium Microcystis and the underlying mechanisms. Results showed that at an antibiotic concentration of 200 ng L-1 (representing environmental concentration levels), slow-growing Microcystis populations exhibited an obvious growth enhancement more than 4-fold greater than that of fast-growing populations, and this enhancement was positively correlated with cellular reserves. A baseline growth rate below 0.19 day-1 emerged as the threshold below which hormetic responses were consistently observed. This study provides pioneering insights into how organisms' physiological states influence pollutant-induced hormetic responses in aquatic environments. Our findings point to a central principle for extrapolation that laboratory-derived toxicological responses may not translate directly to the field unless key physiological traits of the organisms are explicitly considered. In this regard, baseline growth rate and energy reserves may be key physiological traits for reliably predicting toxic effects at the population level. This study also makes an initial attempt to conceptualize a physiology-anchored framework for strengthening risk assessment of low-level emerging contaminants.
Shinya, N.; Han, J.; Kamata, Y.; Taniguchi, M.; Miura, K.; Yazaki, K.; Sugiyama, A.; Munakata, R.
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Abstract Tricyclic coumarins (TCs) exhibit defensive properties against herbivorous insects and possess valuable pharmacological properties for humans. They are mainly distributed in the Apiaceae, Rutaceae, Moraceae, and Fabaceae families. The chemical structural diversity of TCs in these families primarily arises from differences in skeletal variety and attachment position of the third ring, as observed in unsaturated furanocoumarins (FCs) and saturated dihydrofuranocoumarins (DHFCs). In TC biosynthesis, the FC and DHFC pathways diverge through distinct oxidation patterns. The product specificity of the reported cytochrome P450 monooxygenase at the branching point suggests that these TC groups are produced in nearly identical ratios; however, some species of the genus Angelica (Apiaceae) accumulate DHFCs at higher levels than FCs. In this study, we investigated the enzymatic mechanism responsible for forming these two TC groups using A. keiskei, a Japanese native species used as a medicinal and edible herb. Organ-specific transcriptome analysis highlighted a P450 member CYP71AJ62 that exhibited a close correlation with TC accumulation across organs. Enzymatic characterization demonstrated that CYP71AJ62 predominantly forms a hydroxylated DHFC, vaginidiol, which may promote DHFC over FC skeletal formation in TC biosynthesis. Phylogenetic analysis suggested that CYP71AJ62 has been derived from a gene responsible for FC formation by functional shift without gene duplication. Subsequent three-dimensional structural modeling and site-directed mutagenesis revealed that two amino acid residues on substrate recognition sites cooperatively determine the product specificity of this P450 enzyme. This study provides new insights into the molecular evolutionary process underlying ring-structure diversification and, more broadly, the adaptation of plants to their environments.
Deppisch, P.; Colizzi, F. S.; Helfrich-Förster, C.
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Over the course of evolution, many species have adapted to the environmental conditions found at higher latitudes. This is likely also true of the circadian system, which regulates daily behavior and helps measure day length to facilitate adaptation to the seasons, though how the circadian clock adapts to latitude remains largely unknown. Here, we investigated daily activity patterns under long photoperiods and in constant darkness, as well as the underlying circadian clock network, in 52 Drosophila species from around the world. We found a strong, significant positive correlation between the clock's plasticity, measured as the phase difference between morning and evening activity, and the average geographical latitude from which the species originate. The mechanisms underpinning this increase in plasticity differed between species: in the subgenus Siphlodora, the clock weakened with increasing latitude, accompanied by a reduction of the neuropeptide Pigment-Dispersing Factor in the small ventrolateral clock neurons (s-LNv), whereas in the subgenus Drosophila the opposite was true. The subgenus Sophophora, by contrast, showed a negative correlation between circadian plasticity and PDF levels in the s-LNv axons. These results suggest that Drosophila species have evolved diverse, independent strategies to adapt their circadian clock to higher latitudes.
Ramirez-Moreno, D. M.; Fritzler, M.; Pohle, A.-K.; Kannan, K.; Lippman, E.; Nieh, J. C.; Balkwill, K.; Nouvian, M.
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Colony defence is critical for the survival of wild honeybees but presents a challenge for local populations and beekeepers. Apis mellifera scutellata is an important pollinator in its native range, a large area of Southern and Eastern Africa 1, but is reputed for its explosive temperament. Here, we present data demonstrating that this behaviour is only exhibited by a small fraction of colonies, while others are relatively docile. This sheds new light on this subspecies and on its likely evolutionary trajectory. We further characterize the different elements of this defensive response and compare them to that of A. m. carnica and A. m. mellifera. We show that each subspecies invests differently in the two steps of the behavioural sequence (alert and attack). Furthermore, our results suggest that the task of attacking is carried out by specialized workers in carnica, but not in the other subspecies tested, highlighting subtle differences in colony organization across subspecies. Finally, we discovered that defenders from A. m. scutellata and scutellata-hybrid colonies can locate a target that was stung up to 2 h and 3 h earlier, respectively, whereas European bees could only do so for 30 min. This long-term marking could confer an advantage against returning predators with few weak points, such as honey badgers and humans wearing protective clothing. Overall, we offer a fresh perspective on this controversial but important subspecies of honeybees, with implications for both future studies and daily management.
Ji, R.; Wibisono, S.; Sun, J.
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Chemotaxis assays are widely used to quantify sensory-driven behavioral responses in Caenorhabditis elegans. Sodium azide is commonly used to immobilize animals at assay endpoints, although concerns have been raised that diffusion beyond the endpoint region could affect behavior before a choice is completed. We compared sodium azide-mediated immobilization with post-assay cooling using the repellent 1-octanol and attractant diacetyl. Wild-type animals showed robust avoidance of 30% 1-octanol and attraction to 0.5% diacetyl with either method, across multiple assay durations, and with or without worm food Escherichia coli OP50. These results support post-assay cooling as an alternative endpoint-scoring method.
Todd, E.; Denton, A.; Halali, D.; Julian, G. E.; LeBoeuf, A.; Jiggins, C.; de Castro, E. C. P.
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The toxicity of chemical defences is well studied, but the potential contribution of compound structure to predator deterrence remains largely unexplored. Whether predation acts more strongly on toxicity or unpalatability remains largely untested, partly because few systems allow toxin structure to vary independently of quantity. Heliconius sara larvae provide such a system: those reared on Passiflora auriculata sequester cyclopentenyl cyanogenic glucosides (CGs), while those reared on P. biflora biosynthesise comparable quantities of aliphatic CGs. Using two invertebrate predators, Camponotus floridanus ants and Hierodula membranacea mantids, we tested whether this structural difference affects palatability independent of toxicity. Mantids rejected larvae with cyclopentenyl CGs more often than larvae with aliphatic CGs, despite no detectable difference in total CG content. This pattern was mirrored in extract-based assays with ants, independently of cyanide release: extracts with cyclopentenyl CGs remained deterrent, while extracts with aliphatic CGs did not differ in deterrence from water. Live larvae, by contrast, elicited similar responses from ants regardless of CG structure. These results show that variation in toxin structure can strongly affect palatability, with some compounds conferring greater protection than others. This demonstrates the importance of chemical structural diversity in the evolution of chemical defences.
Chang van Oordt, D. A.; Taff, C. C.; Ardia, D. R.; Shipley, J. R.; Vitousek, M. N.
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Developing in suboptimal temperatures can have widespread negative effects in organisms, but early exposure to thermal challenges can also trigger increased investment in thermoregulatory capacity. Within birds, the effects of cold exposure during incubation may differ between precocial and altricial species due to differences in the ontogeny of thermoregulation. To date, most of the evidence showing that embryonic cold exposure shapes future thermoregulatory capacity comes from a few precocial species in laboratory settings. Less is known about sensitivity to low-temperature incubation in altricial species which only become fully endothermic after hatching. In this study, we tested the effects of cold temperatures during embryonic development by temporarily cooling the nest boxes of free-living tree swallows (Tachycineta bicolor) during late incubation and subsequently exposing nestlings to an acute cold challenge. Cold exposure during early development made nestlings better at maintaining their body temperatures during the acute challenge. Developmentally cold-exposed birds also had higher thyroxine (T4) levels when sampled at lower ambient temperatures, whereas control birds showed the opposite relationship. Among nestlings that failed to maintain their body temperature during the acute cold challenge, developmentally cold-exposed nestlings secreted more corticosterone during the acute cold challenge than control nestlings. Despite these changes, cold-exposed birds did not differ from controls in cold-induced metabolic rates, body mass, or bacteria killing ability. These results are, to our knowledge, the first to show that developmental cold exposure increases the capacity to maintain body temperature during future cold challenges in a songbird. These findings suggest that experiencing even a mild decline in ambient temperatures during embryonic development could prime birds to cope more effectively with harsh or variable environmental conditions later in life.
Magdum, P. M.; Grissom, J. N.; Franey, B. T.; Ullah, S.; Abdelaziz, M. H.; North, J.; Sarkar, A.
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Methicillin-resistant Staphylococcus aureus (MRSA) is non-susceptible to beta-lactams. Blockade of cell wall biosynthesis is a potential target for beta-lactam enhancement but requires further investigation. A butyrolactone derivative enhanced beta-lactams against MRSA strains by reducing the availability of D-Ala-D-Ala. Unlike D-cycloserine, it did not inhibit D-Ala-D-Ala ligase (Ddl). Nor did it show an additive or synergistic effect when combined with cycloserine, indicating a unique mechanism for blocking cell wall precursor production that does not involve the traditional Lipid II pathway. Notably, beta-lactam potentiation by our chemical or D-cycloserine was highly dependent on the intrinsic autolytic ability of the tested MRSA strains. Strains that resisted lysis upon Triton X-100 exposure showed a minimal increase in beta-lactam susceptibility, whereas highly autolytic strains showed significant changes in their beta-lactam MICs. We have thus identified autolytic ability as the Achilles Heel in the strategy of targeting cell wall biosynthesis for beta-lactam potentiation.
Scofield, S. L.; Amdam, G. V.
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Corazonin is implicated in regulating diverse behavioral and physiological responses in insects, yet its role in honey bees remains unclear. Work in social and non-social species suggests an ancestral function for corazonin as a metabolic stress signal and a derived function as a pro-foraging signal in social insects. To investigate this hypothesis, we examined corazonin signaling across worker roles and metabolic states and tested its regulatory relationships with pathways central to worker division of labor. Central corazonin levels (both transcript and peptide) were approximately threefold higher in foragers than in nurses. Acute metabolic challenge did not alter brain corazonin but strongly upregulated fat body corazonin receptor (CrzR) transcript in nurses only, suggesting role-specific induction of peripheral sensitivity to corazonin signaling. Injection of synthetic corazonin decreased fat body insulin receptor substrate transcript, while transcripts of vitellogenin (Vg), unpaired-like A, ecdysone receptor B, and Cyp314a1 were unaffected. Measures of gustatory responsiveness, starvation resistance, and hemolymph sugar levels were similarly unaffected by corazonin injection. Reducing Vg through RNA interference in nurse-age bees did not affect CrzR transcript levels, despite vitellogenin's established roles in stress buffering, antioxidant defense, and lifespan. This contrast highlights the specificity of CrzR upregulation in nurses as a response to metabolic challenge rather than general stress. Together, these findings support corazonin as a co-opted nutritional signal that helps shape the forager physiological state, suggesting that it may act in part through interactions with insulin signaling rather than directly regulating classical nutritional or stress-response pathways.
Aghazadeh, S.; Sriram, A.; Miles, C. I.; Miles, R. N.
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We investigated the hearing mechanism of Manduca sexta caterpillars to determine whether their behavioural responses to acoustic stimulation are caused by sound-induced substrate vibration or by direct detection of airborne sound. Behavioural response thresholds to direct substrate vibration and airborne sound were measured using pure-tone stimuli at 150 Hz and 2000 Hz. A frequency of 150 Hz was selected based on previous behavioural measurements showing the lowest sound detection thresholds between approximately 100 and 200 Hz, while 2000 Hz was selected based on laser Doppler vibrometry measurements that revealed a mechanical resonance near this frequency in a thoracic hair. At both test frequencies, the direct substrate vibration detection thresholds were more than 100 times greater, on average, than the sound-induced substrate vibrations measured at the behavioural sound detection thresholds. Thus, the behavioural responses to airborne sound cannot be explained by sound-induced substrate vibration. During airborne sound stimulation, caterpillars exhibited graded behavioural responses with increasing sound pressure level, progressing from freezing to twitching and finally to jump-startle. Together, these findings provide direct experimental evidence that the behavioural responses of M. sexta caterpillars to acoustic stimulation cannot be explained by sound-induced substrate vibration and instead support direct detection of airborne sound. Understanding how caterpillars respond to airborne sound may also provide biological inspiration for the development of bio-inspired acoustic sensors.
Comte, A.; Lalis, M.; Zhang, S.; Thorhallsson, A.; Moracci, R.; Gevar, J.; Montagne, N.; Topin, J.; Mitchell, A.; Fiorucci, S.; Jacquin-Joly, E.
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Host specialization in herbivorous insects is often associated with divergence in chemosensory abilities. Here, we investigated the possible contribution of odorant receptors (ORs) in host plant restriction in the lily moth Spodoptera picta, a species specialized on Amaryllidaceae. Manual annotation of S. picta ORs in its genome revealed a repertoire similar in size and composition to those of its polyphagous sister species, S. littoralis and S. litura, suggesting that specialization did not involve major gene loss or expansion in the lily moth. To assess functional divergence beyond gene number, we applied a large scaled structure-based virtual screening approach to the entire OR repertoires of these three Spodoptera species, generating ligand-binding profiles for 120,591 volatile compounds. Among 69 1:1:1 OR orthologs, 24 exhibited divergent predicted binding spectra. We pinpointed OR29 that we also found to be highly expressed in both male and female antennae of S. picta through a RNAseq approach. Functional assays demonstrated that S. picta OR29 acquired heightened sensitivity to limonene enantiomers, volatiles emitted by host Amaryllidaceae inflorescences. Site-directed mutagenesis revealed that a single amino acid substitution within the predicted binding region underlies this shift in sensitivity. These results show that host specialization in S. picta has not been accompanied by significant OR repertoire remodeling, but rather by subtle molecular changes that fine-tune receptor sensitivity to host-derived volatiles.
Ajibola, W.; Tengolics, R.; Mahmood, B.; Marton, A.; Hunyadi-Gulyas, E.; Vizler, C.; Soki, J.; Darula, Z.; Feher, T.
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The incidence of infections caused by multidrug-resistant bacterial agents has increased at an alarming rate worldwide. With the aim of identifying novel antimicrobial peptides (AMPs), we screened bacteria isolated from various environmental samples. Our hypothesis was that the sequence space of natural AMPs belonging to known AMP classes is far from saturation. We used a classical pipeline of bacterial culturing, overlay assays, extraction and fractionation to purify AMPs for identification. Using LC/MS analysis, the structure of AMPs isolated from a strain of Paenibacillus was narrowed down and a new subclass of polymyxins was uncovered. These harbor three aliphatic residues within the cyclic C-terminal, and in certain cases Ser replaces Thr at position A2. Four discrete polymyxins fitting the new class, but not identical to the natural polymyxins were synthesized and tested against 29 human pathogenic bacteria. Each displayed an antibacterial spectrum different from that of colistin, with the best candidate surpassing it in potency against ten bacterial strains, but underperforming against three others. These results demonstrate that current screening of natural bacterial isolates can still permit the design of novel antimicrobial peptide variants without the substantial threat of diminishing returns.
Munakata, R.; Maeda, Y.; Shimizu, R.; Sugiyama, A.; Kumazawa, S.; Fukumoto, S.; Yazaki, K.
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Macaranga tanarius (Euphorbiaceae), a myrmecophilic plant grown in subtropical countries, was identified as a source of Okinawan propolis, a honeybee product, which is glandular trichomes developed on the surface of the fruits. This tissue contains a high amount of characteristic geranylated flavonoids known as nymphaeols (nymphaeol A - C and isonymphaeol B), which exhibit strong antioxidant activity. In this study, we characterized the structure of glandular trichomes of M. tanarius, showing that they are sac-like structures containing drupelet-like aggregates of secretary cells, and a subcuticular cavity was also observed. From a cDNA library, we identified two prenyltransferase (PT) genes involved in biosynthesis of nymphaeols, and a PT gene grouped in a primary metabolic PT. Our biochemical experiments demonstrated that one of the former secondary metabolic PTs (MtPT1) is a B-ring-specific geranyltransferase for eriodictyol to yield nymphaeols B and isonymphaeol B. MtPT1 was unusual for a plant PT, an enzyme that yielded multiple reaction products. The other PT (MtPT3) transferred a geranyl moiety to the A-ring of eriodictyol to form nymphaeol A. Although dimethylallyl diphosphate (DMAPP) was not recognized as its prenyl donor substrate of eriodictyol, giving a B-ring geranylated eriodyctiol as the prenyl acceptor substrate, this enzyme used DMAPP to attach the prenyl moiety to the A-ring and produced nymphaeol C. These data suggest that M. tanarius has evolved its PT function to produce a diverse range of prenylated flavonoids using a limited set of genes.